Pathway

Illustration by David S. Goodsell, Scripps Research and RCSB Protein Data Bank

Description

A series of actions among molecules in a cell that leads to a certain product or change within that cell, such as spurring cell movement, assembling new molecules, or turning genes on and off. (NIGMS)

Node Properties

identifier - Identifier from source/sources database
level - Pathway level from KEGG or MetaCyc
license - if node from WikiPathways, CC by 4.0
name - Name from source/sources database
reactome_id - Reactome identifier
synonyms - Alternative names from Reactome
url - Link to WikiPathways entry
version - Reactome version number
vestige - True, if the node is present in SPOKE, but was not found in latest WikiPathways update
vestige_ids - identifiers in previous version
source - WikiPathways
sources - KEGG, MetaCyc, and Reactome

Update Information

V7 5,176 nodes

V6 5,951 nodes

V5 5,108 nodes

V4 4,897 nodes

V3 5,872 nodes

V2 5,873 nodes

V1 3,599 nodes