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ASSOCIATES_VaD

Last Updated

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node_web_buttons_proteindomain copy 2.png

Description

The genetic Variant is associated with the Disease.

Properties

  • ClinicalSignificance - Clinical significance Read more >>>

  • alt_allele - ClinVar Any base(s), other than the reference, that is found at that locus

  • collection_method - Collection type(s): case-control, clinical testing, curation, in vitro, in vivo, literature only, not provided, phenotyping only, provider interpretation, reference population, and/or research

  • confidence_score - The confidence score is a measure of how likely it is that a variant is truly associated with a trait

  • p_valueGWAS Catalog p-value

  • p_value_mlogGWAS Catalog -log10 p-value

  • pubmed - PubMed ids

  • ref_allele - The most common allele

  • risk_allele - GWAS Catalog Any base(s), other than the reference, that is found at that locus

  • source - ClinVar or GWAS Catalog

Updates

V5        444,121 edges

V4        441,280 nodes


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