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SPOKE EDGES

Starting node type

Ending node type

Relationship tag

Current

ADVRESPONSE_TO_mGarC

Associated with an adverse response to therapeutic treatment

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Current

AFFECTS_CamG

Evidence for functional interaction of SPOKE compounds with mutant genes.

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Current

AFFECT_VaC

Describes the impact of human genetic variation on drug responses.

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Current

ASSOCIATES_DaG

Genes that are genetically associated with a disease.

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Current

ASSOCIATES_GaS

Genes associated with symptoms.

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Current

ASSOCIATES_SaD

A Social Determinant of Health (SDoH) can be associated with a disease when conditions in a person's environment (e.g., poverty, lack of access to healthy food, pollution) directly or indirectly contribute to the development, progression, or severity of that disease. These environmental factors can influence health behaviors, stress levels, and access to care, ultimately impacting health outcomes.

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Current

ASSOCIATES_VaD

The genetic Variant is associated with the Disease.

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Current

BELONGS_HbG

A haplotype is a group of genetic variations, or polymorphisms, that are inherited together on the same chromosome. This group can encompass one or more genes, and if it includes the variant region of a gene, it can influence how that gene functions.

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Current

BELONGS_VbG

A Variant can belong to a Gene if it is:
Within multiple genes by overlap
Within the single gene
Near the gene, upstream
Near the gene, downstream
Asserted, but not computed
The genes are overlapped by variant

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Current

BELONGS_VbH

A Variant belongs to a Haplotype if it is one of the DNA variants that are typically inherited together as a group. Haplotypes are blocks of DNA that are passed down from parents to children without being recombined. When a Variant BELONGS_VbH to a Haplotype, it means that the variant is located on the same Haplotype as other Variants.

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Current

BINDS_CbP

A causal mechanism mediated by the direct contact between a compound and a protein, which form a stable physical interaction.

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Current

BINDS_CbPD

A causal mechanism mediated by the direct contact between a compound and a protein domain, which form a stable physical interaction.

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Current

CATALYZES_ECcR

Enzyme catalysis is the increase in the rate of a process by a biological molecule, an "enzyme". Most enzymes are proteins, and most such processes are chemical reactions.

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Current

CAUSES_CcSE

The effect of a drug, other than the desired effect, sometimes in an organ other than the target organ. (NIGMS)

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Current

CAUSES_OcD

Human-reviewed organism causes disease relationships.

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Current

CLEAVESTO_PctP

When a protein cleaves to produce a number of polypeptides.

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Current

CONSUMES_RcC

In biochemistry, the substrate is a molecule upon which an enzyme acts. Enzymes catalyze chemical reactions involving the substrate(s).

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Current

CONTAINS_BcC

A blend can contain a compound when that compound is intentionally included as an ingredient in the product's formulation.

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Current

CONTAINS_BcF

A blend can contain a food when that food, or a concentrated or extracted component of it.

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Current

CONTAINS_CcG

A cytoband is a region of a chromosome that is defined based on its unique banding pattern when stained with certain dyes. The CONTAINS_CcG indicates the Gene is contained within the Cytoband region.

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