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Description
eQTLs stand for expression quantitative trait loci, and they are genomic loci that explain variation in gene expression. The UPREGULATES_VuG edge indicates that the genetic Variant upregulates the expression of the Gene it is connected to.
Properties
alternative_allele - Any base, other than the reference, that is found at that locus
beta - Regression coefficient from the linear model.
p_value_permuted - P-values based on 1000 permutations
reference_allele - The most common allele
sources - eQTL Catalogue
study - GTEx, FUSION, Bossini-Castillo_2019, CommonMind, PhLiPS, HipSci, Braineac2, GEUVADIS, Alasoo_2018, iPSCORE, Schwartzentruber_2018, or Young_2019
tissue - Anatomy name
tissue_id - Uberon identifier
Updates
V5 1,304 edges
V4 1,304 edges